Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidase catalytic domainSAMN05421795_102359Not AvailableNegative1288800 - 128940522674.8
cysteine-rich secretory protein family proteinSAMN05421795_102360Not AvailablePositive1289658 - 129017318484.0
l,d-transpeptidase catalytic domainSAMN05421795_102361Not AvailableNegative1290325 - 129084318750.8
23s rrna m(5)u-1939 methyltransferaseSAMN05421795_102362Not AvailableNegative1290948 - 129224944988.0
atp-binding cassette, subfamily bSAMN05421795_102363Not AvailableNegative1292246 - 129410866353.6
poly(a) polymeraseSAMN05421795_102364Not AvailableNegative1294199 - 129538341334.6
8-oxo-dgtp pyrophosphatase mutt, nudix familySAMN05421795_102365Not AvailableNegative1295461 - 129610223195.2
molecular chaperone hsp33SAMN05421795_102366Not AvailableNegative1296044 - 129707837424.2
8-oxo-dgtp diphosphataseSAMN05421795_102367Not AvailablePositive1297194 - 129764316559.9
hypothetical proteinSAMN05421795_102368Not AvailablePositive1297878 - 1301603122260.0

Displaying genes 1301 – 1310 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.