Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna mismatch repair protein mutlSAMN05421795_102319Not AvailablePositive1240941 - 124289068908.8
dna recombination protein rmucSAMN05421795_102320Not AvailablePositive1242887 - 124422747591.4
anti-ecfsigma factor, chrrSAMN05421795_102321Not AvailableNegative1244255 - 124495924457.7
rna polymerase sigma-70 factor, ecf subfamilySAMN05421795_102322Not AvailableNegative1244959 - 124547118917.6
hypothetical proteinSAMN05421795_102323Not AvailablePositive1245840 - 124712947539.8
hypothetical proteinSAMN05421795_102324Not AvailablePositive1247126 - 124797431008.5
glycoside/pentoside/hexuronide:cation symporter, gph familySAMN05421795_102325Not AvailablePositive1247971 - 124932046101.0
protein of unknown functionSAMN05421795_102326Not AvailablePositive1249325 - 124988219907.1
short-chain dehydrogenaseSAMN05421795_102327Not AvailablePositive1249879 - 125061325666.3
penicillin-binding protein 1cSAMN05421795_102328Not AvailableNegative1250605 - 125264170178.9

Displaying genes 1261 – 1270 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.