Rhodobacter vinaykumarii strain DSM 18714

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Phaeovulum

Description

Rhodobacter vinaykumarii strain DSM 18714 is a notable bacterium characterized by its single replicon structure, which is indicative of its genomic organization. The strain has been assigned the accession number FTOM00000000.1, serving as a reference for molecular and genetic studies. This strain belongs to the genus Rhodobacter, which is known for its phototrophic capabilities, allowing it to utilize light energy for growth. The ecological significance of Rhodobacter species, including R. vinaykumarii, lies in their roles in various biogeochemical cycles, particularly in aquatic environments where they contribute to nutrient cycling and organic matter decomposition. Overall, the unique traits of Rhodobacter vinaykumarii strain DSM 18714 not only highlight its genetic framework but also suggest its potential ecological functions in natural ecosystems, particularly in its interactions with light and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPhaeovulum
SpeciesPhaeovulum vinaykumarii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter vinaykumarii strain DSM 18714


Gene Summary

Adenine Count

558188 bp

Thymine Count

546977 bp

Guanine Count

1175725 bp

Cytosine Count

1200487 bp

Genome Length

3481684 bp

Protein-coding Genes

3192 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycolate oxidase iron-sulfur subunitSAMN05421795_10298Not AvailablePositive1030149 - 103141144711.6
v8-like glu-specific endopeptidaseSAMN05421795_10299Not AvailablePositive1031492 - 103228628025.0
molecular chaperone ibpaSAMN05421795_102100Not AvailablePositive1032436 - 103292417913.3
carbamoyl-phosphate synthase large subunitSAMN05421795_102101Not AvailableNegative1033071 - 1036403120051.0
aspartyl-trna synthetaseSAMN05421795_102102Not AvailablePositive1036642 - 103860973323.7
1-deoxy-d-xylulose-5-phosphate synthaseSAMN05421795_102103Not AvailableNegative1038757 - 104066768147.0
farnesyl-diphosphate synthaseSAMN05421795_102104Not AvailableNegative1040687 - 104155330329.2
exodeoxyribonuclease vii small subunitSAMN05421795_102105Not AvailableNegative1041554 - 10417908539.07
threonylcarbamoyladenosine trna methylthiotransferase mtabSAMN05421795_102106Not AvailableNegative1041982 - 104323245155.9
diaminopimelate epimeraseSAMN05421795_102107Not AvailableNegative1043229 - 104408930062.0

Displaying genes 1041 – 1050 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.