Chryseobacterium chaponense strain DSM 23145

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Kaistella

Description

Chryseobacterium chaponense strain DSM 23145 is a Gram-negative, aerobic, rod-shaped bacterium. This strain is characterized by its non-motility and the absence of sporulation, indicating that it does not form spores as a means of survival or reproduction. C. chaponense has a single replicon, which refers to the structure of its genetic material, typically indicating a more straightforward genomic organization. This strain has been associated with Salmo salar, commonly known as Atlantic salmon, suggesting a specific ecological niche within aquatic environments. The relationship between C. chaponense and its host may have implications for understanding microbial interactions in salmon habitats, potentially influencing fish health or ecosystem dynamics. Given its aerobic nature, C. chaponense likely plays a role in the biogeochemical processes within its environment, possibly contributing to the degradation of organic matter or influencing nutrient cycling in aquatic systems. The strain's accession number is FTOI00000000.1, which is relevant for researchers looking to access its genomic information and further investigate its characteristics and ecological roles. Overall, C. chaponense strain DSM 23145 exemplifies the diversity of microbial life in aquatic ecosystems and highlights the importance of studying these organisms to better understand their roles in environmental health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusKaistella
SpeciesKaistella chaponensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Salmo salar
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium chaponense strain DSM 23145 genome assembly,

Gene Summary

Adenine Count

983498 bp

Thymine Count

984958 bp

Guanine Count

543155 bp

Cytosine Count

531539 bp

Genome Length

3043150 bp

Protein-coding Genes

2773 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ring-1,2-phenylacetyl-coa epoxidase subunit paaaSAMN05421789_10116Not AvailableNegative15151 - 1609536190.0
hypothetical proteinSAMN05421789_10117Not AvailableNegative16123 - 163809899.82
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN05421789_10118Not AvailableNegative16398 - 1752242504.9
atp-dependent clp protease atp-binding subunit clpbSAMN05421789_10119Not AvailablePositive17828 - 2042297685.9
atp-binding cassette, subfamily f, member 3SAMN05421789_10120Not AvailablePositive21070 - 2299573569.9
protein of unknown function (4846)SAMN05421789_10121Not AvailableNegative23101 - 2397633294.7
3-hydroxy-3-methylglutaryl-coenzyme a reductaseSAMN05421789_10122Not AvailablePositive24129 - 2545749837.6
hypothetical proteinSAMN05421789_10123Not AvailablePositive25459 - 256296407.42
uncharacterized membrane protein ygdd, tmem256/duf423 familySAMN05421789_10124Not AvailablePositive25633 - 2601914091.1
hypothetical proteinSAMN05421789_10125Not AvailablePositive26019 - 2627910547.0

Displaying genes 21 – 30 of 2815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.