Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Roseovarius
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Roseovarius |
| Species | Roseovarius nanhaiticus |
| Strain | strain DSM 29590 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681767 bp
Thymine Count
676643 bp
Guanine Count
1173390 bp
Cytosine Count
1165647 bp
Genome Length
3698163 bp
Protein-coding Genes
3503 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium uptake protein trka | SAMN05421666_1978 | Not Available | Positive | 2011999 - 2013375 | 49571.7 |
| trk system potassium uptake protein trkh | SAMN05421666_1979 | Not Available | Positive | 2013424 - 2014923 | 52603.1 |
| rna-binding protein hfq | SAMN05421666_1980 | Not Available | Positive | 2015104 - 2015343 | 8913.75 |
| gtp-binding protein hflx | SAMN05421666_1981 | Not Available | Positive | 2015367 - 2016695 | 48980.9 |
| penicillin amidase | SAMN05421666_1982 | Not Available | Negative | 2016697 - 2019171 | 90039.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421666_1983 | Not Available | Positive | 2019303 - 2020175 | 30175.8 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05421666_1984 | Not Available | Negative | 2020277 - 2021509 | 42029.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05421666_1985 | Not Available | Negative | 2021644 - 2022303 | 24137.3 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05421666_1986 | Not Available | Negative | 2022300 - 2023082 | 27704.9 |
| hypothetical protein | SAMN05421666_1987 | Not Available | Positive | 2023238 - 2023471 | 8305.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
