Pontibacter lucknowensis strain DM9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter lucknowensis strain DM9 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. This strain is cataloged under the accession number FTNM00000000.1. As a member of the Pontibacter genus, which is known for its adaptability to extreme environments, P. lucknowensis strain DM9 may exhibit unique metabolic capabilities. The Gram-negative nature of this bacterium often implicates the presence of a double membrane structure, which can be advantageous for survival in various ecological niches. The presence of only one replicon suggests a streamlined genetic organization, potentially contributing to efficient replication and adaptability. This trait may facilitate its survival in changing environments, a characteristic often observed in bacteria from diverse habitats. In ecological contexts, the adaptability of P. lucknowensis strain DM9 could indicate its role in nutrient cycling or its potential use in bioremediation efforts, particularly in environments where other organisms may struggle to thrive. This strain's specific traits position it as an organism of interest for further study, especially concerning its ecological contributions and potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter lucknowensis
Strainstrain DM9

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter lucknowensis strain DM9 genome assembly, contig:

Gene Summary

Adenine Count

1117343 bp

Thymine Count

1112934 bp

Guanine Count

1121125 bp

Cytosine Count

1122468 bp

Genome Length

4474059 bp

Protein-coding Genes

3901 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseSAMN05421545_0071Not AvailablePositive102888 - 10391036018.0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase /udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseSAMN05421545_0072Not AvailablePositive104071 - 10546551189.0
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseSAMN05421545_0073Not AvailablePositive105462 - 10625328644.7
abc-type multidrug transport system, atpase componentSAMN05421545_0074Not AvailablePositive106243 - 10689324659.5
dna-binding regulatory protein, yebc/pmpr familySAMN05421545_0075Not AvailablePositive107012 - 10771926398.3
cation:h+ antiporterSAMN05421545_0076Not AvailablePositive107804 - 10876634483.3
erythromycin esterase homologSAMN05421545_0077Not AvailableNegative108817 - 11009749381.4
protein of unknown functionSAMN05421545_0078Not AvailableNegative110248 - 11097626532.9
competence/damage-inducible protein cinaSAMN05421545_0079Not AvailablePositive111123 - 11238245731.1
2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase)SAMN05421545_0080Not AvailablePositive112499 - 11387548751.5

Displaying genes 71 – 80 of 3946 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.