Pseudacidovorax sp. RU35E

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Pseudacidovorax

Description

Pseudacidovorax sp. RU35E is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and resource utilization. This bacterium is cataloged under accession number FTMY00000000.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The presence of only one replicon suggests a simpler organization that could be advantageous for survival in specific ecological niches. Such organisms often exhibit specialized metabolic capabilities that allow them to thrive in environments where resources may be limited or where competition with other microorganisms is high. Understanding the traits of Pseudacidovorax sp. RU35E could provide insights into its ecological role. Bacteria with streamlined genomes are often involved in unique biogeochemical processes or may play pivotal roles in nutrient cycling. Their adaptations may allow them to exploit specific substrates or conditions that are inhospitable to more complex organisms. In summary, Pseudacidovorax sp. RU35E's single replicon structure signifies potential adaptability and efficiency, positioning it as an organism of interest for further research into its ecological contributions and metabolic capabilities in its natural environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPseudacidovorax
SpeciesPseudacidovorax sp. RU35E
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudacidovorax sp. RU35E genome assembly, contig: Ga0136754_128,

Gene Summary

Adenine Count

883566 bp

Thymine Count

880037 bp

Guanine Count

1960553 bp

Cytosine Count

1961288 bp

Genome Length

5685444 bp

Protein-coding Genes

5127 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette, subfamily c, lapbSAMN05880557_102124Not AvailablePositive759787 - 76197679764.3
membrane fusion protein, adhesin transport systemSAMN05880557_102125Not AvailablePositive761993 - 76342652792.7
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN05880557_102126Not AvailablePositive763479 - 76411722637.3
type i secretion c-terminal target domain (vc_a0849 subclass)SAMN05880557_102127Not AvailablePositive764350 - 774888357040.0
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05880557_102128Not AvailableNegative775035 - 77713174977.2
predicted transglutaminase-like cysteine proteinaseSAMN05880557_102129Not AvailableNegative777196 - 77790626123.2
outer membrane protein, adhesin transport systemSAMN05880557_102130Not AvailablePositive778154 - 78004368554.5
abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding proteinSAMN05880557_102131Not AvailablePositive780348 - 78134935954.3
nitt/taut family transport system permease proteinSAMN05880557_102132Not AvailablePositive781368 - 78223731159.7
nitt/taut family transport system atp-binding proteinSAMN05880557_102133Not AvailablePositive782240 - 78302528801.1

Displaying genes 791 – 800 of 5251 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.