Pseudacidovorax sp. RU35E

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Pseudacidovorax

Description

Pseudacidovorax sp. RU35E is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and resource utilization. This bacterium is cataloged under accession number FTMY00000000.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. The presence of only one replicon suggests a simpler organization that could be advantageous for survival in specific ecological niches. Such organisms often exhibit specialized metabolic capabilities that allow them to thrive in environments where resources may be limited or where competition with other microorganisms is high. Understanding the traits of Pseudacidovorax sp. RU35E could provide insights into its ecological role. Bacteria with streamlined genomes are often involved in unique biogeochemical processes or may play pivotal roles in nutrient cycling. Their adaptations may allow them to exploit specific substrates or conditions that are inhospitable to more complex organisms. In summary, Pseudacidovorax sp. RU35E's single replicon structure signifies potential adaptability and efficiency, positioning it as an organism of interest for further research into its ecological contributions and metabolic capabilities in its natural environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusPseudacidovorax
SpeciesPseudacidovorax sp. RU35E
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudacidovorax sp. RU35E genome assembly, contig: Ga0136754_128,

Gene Summary

Adenine Count

883566 bp

Thymine Count

880037 bp

Guanine Count

1960553 bp

Cytosine Count

1961288 bp

Genome Length

5685444 bp

Protein-coding Genes

5127 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN05880557_10647Not AvailableNegative2621464 - 262215324995.1
regulator of sirc expression, contains transglutaminase-like and tpr domainsSAMN05880557_10648Not AvailableNegative2622291 - 262314231746.0
putative peptidoglycan lipid ii flippaseSAMN05880557_10649Not AvailableNegative2623229 - 262486957951.7
ssu ribosomal protein s20pSAMN05880557_10650Not AvailablePositive2624958 - 262527210942.3
protein of unknown functionSAMN05880557_10651Not AvailableNegative2625413 - 262573611703.0
acetylornithine aminotransferaseSAMN05880557_10652Not AvailablePositive2625916 - 262712142541.7
ornithine carbamoyltransferaseSAMN05880557_10653Not AvailablePositive2627126 - 262808235646.3
hypothetical proteinSAMN05880557_10654Not AvailablePositive2628102 - 262841010750.9
kynurenine formamidaseSAMN05880557_10655Not AvailablePositive2628495 - 262915123447.2
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05880557_10656Not AvailableNegative2629158 - 262953813492.4

Displaying genes 2511 – 2520 of 5251 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.