Rhizobium sp. RU33A

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. RU33A is a rod-shaped bacterium that possesses flagella, which allows for motility. This characteristic is significant for its ecological interactions and adaptability within various environments. The organism has a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and cellular processes. The accession number for Rhizobium sp. RU33A is FTMQ00000000.1, which provides a reference for genetic and genomic studies. This identification can facilitate further research into its traits and functionality within ecosystems. In terms of its ecological role, Rhizobium species, including RU33A, are well-known for their symbiotic relationship with legumes. They form nodules on the roots of host plants, where they fix atmospheric nitrogen, an essential process for improving soil fertility and supporting plant growth. The motility provided by flagella may enhance their ability to locate and colonize host roots, thus playing a crucial role in the nitrogen cycle. In summary, Rhizobium sp. RU33A's rod shape, motility due to flagella, and single replicon structure contribute to its ecological function as a nitrogen-fixing bacterium, supporting plant health and soil quality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. RU33A
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. RU33A
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. RU33A genome assembly, contig: Ga0136762_125, whole

Gene Summary

Adenine Count

934818 bp

Thymine Count

954713 bp

Guanine Count

1486276 bp

Cytosine Count

1473674 bp

Genome Length

4849481 bp

Protein-coding Genes

4584 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate permeaseSAMN05880561_10138Not AvailableNegative39077 - 4041147559.6
cytochrome o ubiquinol oxidase subunit 2SAMN05880561_10139Not AvailablePositive40649 - 4185444261.8
cytochrome o ubiquinol oxidase subunit 1SAMN05880561_10140Not AvailablePositive41867 - 4387074706.4
cytochrome o ubiquinol oxidase subunit 3SAMN05880561_10141Not AvailablePositive43876 - 4449623059.7
cytochrome o ubiquinol oxidase operon protein cyodSAMN05880561_10142Not AvailablePositive44496 - 4489414604.8
surfeit locus 1 family proteinSAMN05880561_10143Not AvailablePositive44912 - 4561325542.5
transcriptional regulator, tetr familySAMN05880561_10144Not AvailableNegative45634 - 4624522679.2
rnd family efflux transporter, mfp subunitSAMN05880561_10145Not AvailablePositive46433 - 4756040100.4
rnd family efflux transporter, mfp subunitSAMN05880561_10146Not AvailablePositive47557 - 4864237747.9
multidrug efflux pump subunit acrbSAMN05880561_10147Not AvailablePositive48639 - 51692110073.0

Displaying genes 61 – 70 of 4645 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.