Corynebacterium afermentans strain DSM 44280

rodmicroaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium afermentans strain DSM 44280 is a Gram-positive, non-spore-forming bacterium characterized by its rod shape. This strain is classified as a microaerophile, indicating that it requires low levels of oxygen for optimal growth. It thrives at an optimal temperature of 29°C, positioning it within the mesophilic temperature range, which is generally conducive to growth in moderate temperature environments. The strain has a single replicon, highlighting its genetic structure, which may be significant for studies related to its genetics and metabolic capabilities. The accession number for this strain is FTMH00000000.1, allowing for easy reference and identification in databases. Understanding the traits of Corynebacterium afermentans DSM 44280 contributes to broader ecological insights, particularly regarding its potential roles in specific environments. As a microaerophile, it may inhabit niches where oxygen is limited but not absent, such as in certain soil or host-associated environments. The absence of spore formation suggests that this strain may not survive in extreme conditions, indicating a potential reliance on favorable habitats for persistence and growth. This specificity may influence its interactions with other microbial communities and its ecological functions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium afermentans
Strainstrain DSM 44280

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium afermentans strain DSM 44280
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature29
Temperature rangemesophilic
Habitatfeet
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium afermentans strain DSM 44280 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2171 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s30p /sigma 54 modulation proteinSAMN05421802_103114Not AvailablePositive465357 - 46604925643.0
preprotein translocase subunit secaSAMN05421802_103115Not AvailablePositive466252 - 46881395545.0
hypothetical proteinSAMN05421802_103116Not AvailableNegative468840 - 46927115309.7
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN05421802_103117Not AvailablePositive469425 - 46983814912.6
hypothetical proteinSAMN05421802_103118Not AvailablePositive469838 - 47034118024.0
ribosome biogenesis gtpaseSAMN05421802_103119Not AvailableNegative470315 - 47134036844.6
3-phosphoshikimate 1-carboxyvinyltransferaseSAMN05421802_103120Not AvailableNegative471340 - 47262044781.6
putative sos response-associated peptidase yedkSAMN05421802_103121Not AvailablePositive472634 - 47329624493.1
cys-trna(pro)/cys-trna(cys) deacylaseSAMN05421802_103122Not AvailableNegative473312 - 47377616059.3
rna polymerase, sigma subunit, ecf familySAMN05421802_103123Not AvailablePositive473813 - 47446024272.7

Displaying genes 431 – 440 of 2227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.