Corynebacterium afermentans strain DSM 44280

rodmicroaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium afermentans strain DSM 44280 is a Gram-positive, non-spore-forming bacterium characterized by its rod shape. This strain is classified as a microaerophile, indicating that it requires low levels of oxygen for optimal growth. It thrives at an optimal temperature of 29°C, positioning it within the mesophilic temperature range, which is generally conducive to growth in moderate temperature environments. The strain has a single replicon, highlighting its genetic structure, which may be significant for studies related to its genetics and metabolic capabilities. The accession number for this strain is FTMH00000000.1, allowing for easy reference and identification in databases. Understanding the traits of Corynebacterium afermentans DSM 44280 contributes to broader ecological insights, particularly regarding its potential roles in specific environments. As a microaerophile, it may inhabit niches where oxygen is limited but not absent, such as in certain soil or host-associated environments. The absence of spore formation suggests that this strain may not survive in extreme conditions, indicating a potential reliance on favorable habitats for persistence and growth. This specificity may influence its interactions with other microbial communities and its ecological functions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium afermentans
Strainstrain DSM 44280

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium afermentans strain DSM 44280
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature29
Temperature rangemesophilic
Habitatfeet
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium afermentans strain DSM 44280 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2171 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase iiSAMN05421802_101106Not AvailableNegative109557 - 11081045083.2
riboflavin synthase alpha chainSAMN05421802_101107Not AvailableNegative110822 - 11140920816.7
diaminohydroxyphosphoribosylaminopyrimidine deaminase /5-amino-6-(5-phosphoribosylamino)uracil reductaseSAMN05421802_101108Not AvailableNegative111390 - 11238834608.9
ribulose-5-phosphate 3-epimeraseSAMN05421802_101109Not AvailableNegative112385 - 11304723459.0
16s rrna (cytosine967-c5)-methyltransferaseSAMN05421802_101110Not AvailableNegative113058 - 11453652781.5
methionyl-trna formyltransferaseSAMN05421802_101111Not AvailableNegative114533 - 11546232467.6
peptide deformylaseSAMN05421802_101112Not AvailableNegative115476 - 11596717916.8
replication restart dna helicase priaSAMN05421802_101113Not AvailableNegative116008 - 11807173372.5
peptidoglycan/xylan/chitin deacetylase, pgda/cda1 familySAMN05421802_101114Not AvailablePositive118153 - 11913634876.3
hypothetical proteinSAMN05421802_101115Not AvailablePositive119154 - 11951312768.7

Displaying genes 111 – 120 of 2227 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.