Xenorhabdus innexi strain HGB1681 (deposited as PTA-6826 in the

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus innexi strain HGB1681, deposited as PTA-6826, is characterized as a rod-shaped bacterium. It possesses a single flagellum, which facilitates motility. The strain is noted for having one replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FTLG00000000.1. Xenorhabdus species are known for their mutualistic relationships with entomopathogenic nematodes, particularly in the genus Steinernema. This association allows the bacteria to effectively colonize insect hosts, where they can proliferate and produce various bioactive compounds. The traits observed in strain HGB1681 suggest potential ecological roles in insect pathology, as the presence of flagella may enhance its ability to navigate through host tissues or soil environments. The specific characteristics of Xenorhabdus innexi strain HGB1681 highlight its potential contributions to biological control strategies, particularly in managing insect pests. Understanding the genetic and phenotypic traits of this strain can provide insights into its ecological interactions and applications in biocontrol, as well as its role within the broader microbial community associated with nematodes. Further research into its biochemical pathways and interactions could unveil additional applications in agriculture and pest management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus innexi
Strainstrain HGB1681 (deposited as PTA-6826 in the

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus innexi strain HGB1681 (deposited as PTA-6826 in the

Gene Summary

Adenine Count

1261396 bp

Thymine Count

1267624 bp

Guanine Count

983742 bp

Cytosine Count

977316 bp

Genome Length

4490078 bp

Protein-coding Genes

3954 genes

Non-Coding Genes

352 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conserved hypothetical protein with impa domain (probable component of sst vi cluster)XIS1_1110010Not AvailableNegative308139 - 30950351519.6
conserved hypothetical protein (probable component of sst vi cluster)XIS1_1110011Not AvailableNegative309649 - 313254138372.0
conserved hypothetical protein with impa domain(probable component of sst vi cluster)XIS1_1110012Not AvailableNegative313251 - 31475355524.4
conserved exported hypothetical proteinXIS1_1110013Not AvailableNegative314759 - 31547826768.4
conserved hypothetical protein (probable component of sst vi cluster)XIS1_1110014Not AvailableNegative315475 - 31627230327.5
putative clpa/b-type chaperone (putative atpase with chaperone activityXIS1_1110015Not AvailableNegative316272 - 319025101902.0
conserved hypothetical protein (probable component of sst vi cluster)XIS1_1110016Not AvailableNegative319035 - 31982630566.0
conserved hypothetical protein (probable component of sst vi cluster)XIS1_1110017Not AvailableNegative319842 - 32119450408.7
conserved hypothetical protein (probable lipoprotein of sst vi cluster)XIS1_1110018Not AvailableNegative321197 - 32175421102.2
conserved hypothetical protein with fha domain (probable component of sst vi cluster)XIS1_1110019Not AvailableNegative321738 - 32303348617.7

Displaying genes 661 – 670 of 2123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.