Xenorhabdus innexi strain HGB1681 (deposited as PTA-6826 in the

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Xenorhabdus

Description

Xenorhabdus innexi strain HGB1681, deposited as PTA-6826, is characterized as a rod-shaped bacterium. It possesses a single flagellum, which facilitates motility. The strain is noted for having one replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FTLG00000000.1. Xenorhabdus species are known for their mutualistic relationships with entomopathogenic nematodes, particularly in the genus Steinernema. This association allows the bacteria to effectively colonize insect hosts, where they can proliferate and produce various bioactive compounds. The traits observed in strain HGB1681 suggest potential ecological roles in insect pathology, as the presence of flagella may enhance its ability to navigate through host tissues or soil environments. The specific characteristics of Xenorhabdus innexi strain HGB1681 highlight its potential contributions to biological control strategies, particularly in managing insect pests. Understanding the genetic and phenotypic traits of this strain can provide insights into its ecological interactions and applications in biocontrol, as well as its role within the broader microbial community associated with nematodes. Further research into its biochemical pathways and interactions could unveil additional applications in agriculture and pest management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusXenorhabdus
SpeciesXenorhabdus innexi
Strainstrain HGB1681 (deposited as PTA-6826 in the

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xenorhabdus innexi strain HGB1681 (deposited as PTA-6826 in the

Gene Summary

Adenine Count

1261396 bp

Thymine Count

1267624 bp

Guanine Count

983742 bp

Cytosine Count

977316 bp

Genome Length

4490078 bp

Protein-coding Genes

3954 genes

Non-Coding Genes

352 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional purine biosynthesis protein purh (includes: phosphoribosylaminoimidazolecarboxamide formyltransferaseXIS1_1070001Not AvailablePositive184657 - 18632460607.4
phosphoribosylamine--glycine ligaseXIS1_1070002Not AvailablePositive186346 - 18762945502.6
conserved exported hypothetical proteinXIS1_1070003Not AvailableNegative187679 - 18833224797.4
dna-binding protein hu-alphaXIS1_1070004Not AvailableNegative188383 - 1886559265.12
conserved hypothetical proteinXIS1_1070005Not AvailableNegative188840 - 18943022513.0
endonuclease vXIS1_1070006Not AvailableNegative189507 - 19027728697.0
uroporphyrinogen decarboxylaseXIS1_1070007Not AvailableNegative190222 - 19128639307.5
hypothetical proteinXIS1_1070008Not AvailablePositive191400 - 1916399241.35
peptidyl-dipeptidase dcpXIS1_1070009Not AvailablePositive191773 - 19398983895.0
nadh pyrophosphataseXIS1_1070010Not AvailableNegative194088 - 19489431336.5

Displaying genes 551 – 560 of 2123 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.