Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0915 | Not Available | Positive | 1227021 - 1229801 | 103418.0 |
| starch-binding associating with outer membrane | SAMN04488055_0916 | Not Available | Positive | 1229808 - 1231448 | 61289.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0917 | Not Available | Positive | 1231469 - 1234543 | 114237.0 |
| starch-binding associating with outer membrane | SAMN04488055_0918 | Not Available | Positive | 1234551 - 1236296 | 65728.3 |
| alpha-l-fucosidase | SAMN04488055_0919 | Not Available | Positive | 1236299 - 1237696 | 53687.0 |
| pas domain s-box-containing protein | SAMN04488055_0920 | Not Available | Negative | 1237920 - 1239416 | 57666.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488055_0921 | Not Available | Positive | 1239540 - 1240640 | 40627.9 |
| calcineurin-like phosphoesterase superfamily domain-containing protein | SAMN04488055_0922 | Not Available | Negative | 1240623 - 1241705 | 41870.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488055_0923 | Not Available | Positive | 1241742 - 1242566 | 30781.0 |
| transcriptional regulator, deor family | SAMN04488055_0924 | Not Available | Positive | 1242625 - 1243389 | 27870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
