Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0885 | Not Available | Positive | 1186789 - 1189989 | 117653.0 |
| susd family protein | SAMN04488055_0886 | Not Available | Positive | 1190001 - 1191389 | 52366.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488055_0887 | Not Available | Positive | 1191389 - 1193176 | 67353.1 |
| dna-binding transcriptional regulator, fadr family | SAMN04488055_0888 | Not Available | Positive | 1193334 - 1194032 | 26591.6 |
| hypothetical protein | SAMN04488055_0889 | Not Available | Positive | 1194350 - 1195459 | 40964.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0890 | Not Available | Positive | 1195488 - 1198412 | 105900.0 |
| starch-binding associating with outer membrane | SAMN04488055_0891 | Not Available | Positive | 1198417 - 1199934 | 56085.4 |
| sialidase-1 | SAMN04488055_0892 | Not Available | Positive | 1199928 - 1201022 | 40247.1 |
| transporter, sss family | SAMN04488055_0893 | Not Available | Positive | 1201024 - 1203543 | 91619.8 |
| hypothetical protein | SAMN04488055_0894 | Not Available | Positive | 1203546 - 1204475 | 35713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
