Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04488055_0855 | Not Available | Negative | 1151283 - 1152278 | 36804.9 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488055_0856 | Not Available | Positive | 1152352 - 1153884 | 59366.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488055_0857 | Not Available | Negative | 1153923 - 1156157 | 81519.2 |
| threonine/homoserine efflux transporter rhta | SAMN04488055_0858 | Not Available | Positive | 1156468 - 1157322 | 30646.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04488055_0859 | Not Available | Negative | 1157410 - 1158438 | 36818.7 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488055_0860 | Not Available | Negative | 1158442 - 1159215 | 28458.4 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488055_0861 | Not Available | Negative | 1159223 - 1160014 | 28789.5 |
| hypothetical protein | SAMN04488055_0862 | Not Available | Positive | 1160146 - 1160643 | 19122.3 |
| ompa family protein | SAMN04488055_0863 | Not Available | Positive | 1160754 - 1162049 | 46893.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0864 | Not Available | Positive | 1162196 - 1162795 | 22839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
