Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN04488055_0835 | Not Available | Positive | 1120546 - 1122015 | 54126.5 |
| uncharacterized protein, contains gba2_n and duf608 domains | SAMN04488055_0836 | Not Available | Positive | 1122282 - 1124810 | 93690.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0837 | Not Available | Positive | 1124946 - 1127999 | 112881.0 |
| starch-binding associating with outer membrane | SAMN04488055_0838 | Not Available | Positive | 1128020 - 1129795 | 67481.0 |
| protein of unknown function | SAMN04488055_0839 | Not Available | Positive | 1129789 - 1131435 | 63651.5 |
| hypothetical protein | SAMN04488055_0840 | Not Available | Positive | 1131399 - 1132358 | 36274.5 |
| mfs transporter, fhs family, l-fucose permease | SAMN04488055_0841 | Not Available | Negative | 1132347 - 1133609 | 46575.2 |
| 2-dehydro-3-deoxy-d-arabinonate dehydratase | SAMN04488055_0842 | Not Available | Negative | 1133761 - 1134618 | 32205.2 |
| hypothetical protein | SAMN04488055_0843 | Not Available | Negative | 1134626 - 1135837 | 43931.7 |
| altronate hydrolase | SAMN04488055_0844 | Not Available | Negative | 1135870 - 1137477 | 57957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
