Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0815 | Not Available | Negative | 1093769 - 1094974 | 45389.5 |
| uncharacterized conserved protein | SAMN04488055_0816 | Not Available | Negative | 1094976 - 1095329 | 12950.6 |
| dihydrofolate reductase | SAMN04488055_0817 | Not Available | Negative | 1095340 - 1095897 | 20342.6 |
| polygalacturonase | SAMN04488055_0818 | Not Available | Negative | 1096003 - 1097541 | 55649.3 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488055_0819 | Not Available | Negative | 1097629 - 1100028 | 88730.0 |
| citronellol/citronellal dehydrogenase | SAMN04488055_0820 | Not Available | Negative | 1100160 - 1100978 | 29245.2 |
| hypothetical protein | SAMN04488055_0821 | Not Available | Negative | 1101008 - 1102048 | 39247.0 |
| cytochrome c, mono-and diheme variants | SAMN04488055_0822 | Not Available | Negative | 1102045 - 1103001 | 35190.2 |
| hypothetical protein | SAMN04488055_0823 | Not Available | Positive | 1103237 - 1104784 | 54343.4 |
| hypothetical protein | SAMN04488055_0824 | Not Available | Positive | 1104799 - 1106340 | 54650.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
