Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488055_0714 | Not Available | Positive | 968506 - 970086 | 59243.0 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN04488055_0715 | Not Available | Positive | 970107 - 971303 | 44660.0 |
| zinc protease | SAMN04488055_0716 | Not Available | Positive | 971383 - 974226 | 105038.0 |
| hypothetical protein | SAMN04488055_0717 | Not Available | Negative | 974314 - 976638 | 89711.9 |
| conserved hypothetical protein, hne_0200 family | SAMN04488055_0718 | Not Available | Negative | 976662 - 977669 | 37612.0 |
| parallel beta-helix repeat-containing protein | SAMN04488055_0719 | Not Available | Negative | 977679 - 978941 | 45681.2 |
| carboxypepd_reg-like domain-containing protein | SAMN04488055_0720 | Not Available | Negative | 978955 - 981705 | 101191.0 |
| lyttr dna-binding domain-containing protein | SAMN04488055_0721 | Not Available | Negative | 981806 - 982678 | 32866.4 |
| protein of unknown function (4846) | SAMN04488055_0722 | Not Available | Positive | 982760 - 983530 | 28523.4 |
| cold-shock dna-binding protein family | SAMN04488055_0723 | Not Available | Negative | 983582 - 983785 | 7830.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
