Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin esterase | SAMN04488055_0654 | Not Available | Positive | 865797 - 866669 | 33178.9 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04488055_0655 | Not Available | Positive | 866678 - 869302 | 98607.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0656 | Not Available | Positive | 869792 - 870394 | 23264.7 |
| fecr protein | SAMN04488055_0657 | Not Available | Positive | 870465 - 871616 | 42450.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0658 | Not Available | Positive | 871703 - 875086 | 125586.0 |
| starch-binding associating with outer membrane | SAMN04488055_0659 | Not Available | Positive | 875102 - 876604 | 56169.3 |
| exodeoxyribonuclease-3 | SAMN04488055_0660 | Not Available | Positive | 876613 - 877449 | 31452.9 |
| hypothetical protein | SAMN04488055_0661 | Not Available | Positive | 877453 - 879486 | 74540.4 |
| uncharacterized conserved protein | SAMN04488055_0662 | Not Available | Positive | 879591 - 879914 | 11742.3 |
| chrd domain-containing protein | SAMN04488055_0663 | Not Available | Negative | 879963 - 880766 | 28350.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
