Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488055_0634 | Not Available | Negative | 828432 - 831866 | 125222.0 |
| starch-binding associating with outer membrane | SAMN04488055_0635 | Not Available | Negative | 831928 - 833370 | 53168.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0636 | Not Available | Negative | 833382 - 836645 | 118695.0 |
| fecr protein | SAMN04488055_0637 | Not Available | Negative | 836899 - 838038 | 41273.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0638 | Not Available | Negative | 838094 - 838672 | 22612.6 |
| protein of unknown function | SAMN04488055_0639 | Not Available | Negative | 838777 - 840021 | 46241.6 |
| pkd domain-containing protein | SAMN04488055_0640 | Not Available | Negative | 840018 - 840803 | 28443.2 |
| starch-binding associating with outer membrane | SAMN04488055_0641 | Not Available | Negative | 840797 - 842494 | 64191.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0642 | Not Available | Negative | 842507 - 845290 | 101735.0 |
| starch-binding associating with outer membrane | SAMN04488055_0643 | Not Available | Negative | 845319 - 847025 | 64771.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
