Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0603 | Not Available | Negative | 786615 - 787199 | 21923.7 |
| hypothetical protein | SAMN04488055_0604 | Not Available | Negative | 787316 - 788377 | 38598.1 |
| putative zinc-binding metallo-peptidase | SAMN04488055_0605 | Not Available | Negative | 788423 - 789376 | 35564.6 |
| susd family protein | SAMN04488055_0606 | Not Available | Negative | 789405 - 790880 | 55610.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0607 | Not Available | Negative | 790922 - 794320 | 126469.0 |
| dna-binding transcriptional regulator, hxlr family | SAMN04488055_0608 | Not Available | Negative | 794694 - 795074 | 14857.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488055_0609 | Not Available | Positive | 795163 - 795915 | 26936.4 |
| arac-type dna-binding protein | SAMN04488055_0610 | Not Available | Negative | 795912 - 796808 | 34599.4 |
| sugar phosphate isomerase/epimerase | SAMN04488055_0611 | Not Available | Positive | 796970 - 797854 | 33050.6 |
| l-alanine-dl-glutamate epimerase | SAMN04488055_0612 | Not Available | Positive | 797874 - 799040 | 42043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
