Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repeat domain-containing protein | SAMN04488055_0583 | Not Available | Negative | 751512 - 752633 | 41660.7 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488055_0584 | Not Available | Negative | 752630 - 756121 | 129427.0 |
| protein of unknown function | SAMN04488055_0585 | Not Available | Negative | 756125 - 756808 | 25331.1 |
| starch-binding associating with outer membrane | SAMN04488055_0586 | Not Available | Negative | 756808 - 758712 | 71132.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0587 | Not Available | Negative | 758724 - 762050 | 124413.0 |
| fecr protein | SAMN04488055_0588 | Not Available | Negative | 762144 - 763289 | 42571.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0589 | Not Available | Negative | 763363 - 763947 | 22677.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488055_0590 | Not Available | Negative | 764068 - 764826 | 28694.5 |
| signal transduction histidine kinase | SAMN04488055_0591 | Not Available | Negative | 764816 - 767965 | 119656.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0592 | Not Available | Positive | 768145 - 771189 | 111731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
