Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0573 | Not Available | Positive | 736957 - 740250 | 122796.0 |
| starch-binding associating with outer membrane | SAMN04488055_0574 | Not Available | Positive | 740260 - 741999 | 65366.8 |
| duf218 domain-containing protein | SAMN04488055_0575 | Not Available | Positive | 742017 - 743195 | 44409.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04488055_0576 | Not Available | Positive | 743210 - 744796 | 59263.4 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488055_0577 | Not Available | Positive | 744827 - 745642 | 29518.0 |
| hypothetical protein | SAMN04488055_0578 | Not Available | Positive | 745650 - 747578 | 69936.3 |
| glucose/galactose transporter | SAMN04488055_0579 | Not Available | Positive | 747586 - 748854 | 45360.9 |
| badf-type atpase | SAMN04488055_0580 | Not Available | Positive | 748857 - 749705 | 31522.8 |
| copper chaperone copz | SAMN04488055_0581 | Not Available | Negative | 749747 - 750145 | 14864.1 |
| d-psicose/d-tagatose/l-ribulose 3-epimerase | SAMN04488055_0582 | Not Available | Negative | 750660 - 751505 | 31077.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
