Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488055_0563 | Not Available | Negative | 722120 - 722908 | 29985.9 |
| atp-dependent rna helicase rhle | SAMN04488055_0564 | Not Available | Negative | 722945 - 724186 | 47038.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488055_0565 | Not Available | Positive | 724214 - 724885 | 25875.6 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_0566 | Not Available | Positive | 724943 - 725953 | 38555.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0567 | Not Available | Positive | 726039 - 729500 | 130536.0 |
| susd family protein | SAMN04488055_0568 | Not Available | Positive | 729512 - 730972 | 55330.3 |
| protein of unknown function | SAMN04488055_0569 | Not Available | Positive | 730983 - 731816 | 31332.5 |
| pkd-like family protein | SAMN04488055_0570 | Not Available | Positive | 731833 - 733248 | 53163.6 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488055_0571 | Not Available | Positive | 733392 - 735809 | 90191.4 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN04488055_0572 | Not Available | Negative | 735871 - 736623 | 27844.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
