Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN04488055_5658 | Not Available | Positive | 6878353 - 6878694 | 12623.3 |
| rna polymerase, sigma subunit, ecf family | SAMN04488055_5659 | Not Available | Positive | 6878759 - 6880003 | 46958.5 |
| alpha-galactosidase | SAMN04488055_5660 | Not Available | Negative | 6879985 - 6881877 | 70314.4 |
| alpha-galactosidase | SAMN04488055_5661 | Not Available | Negative | 6881889 - 6884009 | 80897.4 |
| regulatory protein, gntr family | SAMN04488055_5662 | Not Available | Negative | 6884019 - 6885035 | 38663.9 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04488055_5663 | Not Available | Positive | 6885208 - 6886203 | 36803.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_5664 | Not Available | Positive | 6886446 - 6889559 | 114267.0 |
| starch-binding associating with outer membrane | SAMN04488055_5665 | Not Available | Positive | 6889579 - 6891414 | 69397.1 |
| protein of unknown function | SAMN04488055_5666 | Not Available | Positive | 6891436 - 6892638 | 44601.7 |
| na+/proline symporter | SAMN04488055_5667 | Not Available | Positive | 6892658 - 6894487 | 66821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
