Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN04488055_5527 | Not Available | Negative | 6718566 - 6721271 | 99627.9 |
| lysophospholipase l1 | SAMN04488055_5528 | Not Available | Negative | 6721397 - 6723502 | 78362.9 |
| alpha-1,2-mannosidase, putative | SAMN04488055_5529 | Not Available | Positive | 6723641 - 6725770 | 79935.8 |
| hypothetical protein | SAMN04488055_5530 | Not Available | Negative | 6725851 - 6726081 | 8302.44 |
| hypothetical protein | SAMN04488055_5531 | Not Available | Negative | 6726068 - 6726736 | 24271.9 |
| transketolase | SAMN04488055_5532 | Not Available | Positive | 6726870 - 6728864 | 73161.2 |
| putative hydrolase of the had superfamily | SAMN04488055_5533 | Not Available | Positive | 6728851 - 6729459 | 23336.1 |
| hypothetical protein | SAMN04488055_5534 | Not Available | Positive | 6729456 - 6730211 | 28238.7 |
| hypothetical protein | SAMN04488055_5535 | Not Available | Positive | 6730347 - 6731558 | 44783.0 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488055_5536 | Not Available | Negative | 6731601 - 6733904 | 86642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
