Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488055_0543 | Not Available | Negative | 697250 - 698626 | 49741.1 |
| dipeptidyl peptidase iv (dpp iv) n-terminal region | SAMN04488055_0544 | Not Available | Positive | 698783 - 701011 | 85035.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488055_0545 | Not Available | Positive | 701079 - 702434 | 50994.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488055_0546 | Not Available | Positive | 702431 - 703120 | 25930.7 |
| carboxypepd_reg-like domain-containing protein | SAMN04488055_0547 | Not Available | Positive | 703198 - 705912 | 101126.0 |
| glpgli family protein | SAMN04488055_0548 | Not Available | Positive | 705914 - 706603 | 25238.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0549 | Not Available | Positive | 706713 - 707294 | 22464.4 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_0550 | Not Available | Positive | 707356 - 708384 | 38595.1 |
| iron complex outermembrane recepter protein | SAMN04488055_0551 | Not Available | Positive | 708444 - 712163 | 136039.0 |
| susd and ragb outer membrane lipoprotein | SAMN04488055_0552 | Not Available | Positive | 712187 - 713863 | 63831.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
