Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488055_5374 | Not Available | Positive | 6573559 - 6575205 | 62344.8 |
| alpha-1,2-mannosidase, putative | SAMN04488055_5375 | Not Available | Positive | 6575331 - 6577619 | 86656.6 |
| alpha-1,2-mannosidase, putative | SAMN04488055_5376 | Not Available | Negative | 6577715 - 6579997 | 86891.7 |
| l-amino acid n-acyltransferase ynca | SAMN04488055_5377 | Not Available | Negative | 6580060 - 6580662 | 21779.3 |
| hypothetical protein | SAMN04488055_5378 | Not Available | Negative | 6580665 - 6581033 | 14365.8 |
| protein of unknown function | SAMN04488055_5379 | Not Available | Positive | 6581260 - 6582414 | 43413.9 |
| hypothetical protein | SAMN04488055_5380 | Not Available | Positive | 6582463 - 6582669 | 8001.52 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_5381 | Not Available | Positive | 6582922 - 6583455 | 21236.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_5382 | Not Available | Positive | 6583703 - 6587269 | 133224.0 |
| susd family protein | SAMN04488055_5383 | Not Available | Positive | 6587281 - 6588672 | 52427.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
