Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_5354 | Not Available | Negative | 6547803 - 6548369 | 21966.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488055_5355 | Not Available | Negative | 6548471 - 6549886 | 52602.7 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488055_5356 | Not Available | Positive | 6549908 - 6551107 | 44768.9 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04488055_5357 | Not Available | Negative | 6551311 - 6552402 | 40293.3 |
| tagaturonate reductase | SAMN04488055_5358 | Not Available | Positive | 6552648 - 6554147 | 55503.9 |
| glucuronate isomerase | SAMN04488055_5359 | Not Available | Positive | 6554156 - 6555550 | 52668.4 |
| 2-dehydro-3-deoxygluconokinase | SAMN04488055_5360 | Not Available | Positive | 6555550 - 6556548 | 36712.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04488055_5361 | Not Available | Positive | 6556555 - 6557217 | 24053.0 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488055_5362 | Not Available | Positive | 6557258 - 6558553 | 47768.0 |
| altronate hydrolase | SAMN04488055_5363 | Not Available | Negative | 6558625 - 6560271 | 59254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
