Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd and ragb outer membrane lipoprotein | SAMN04488055_5304 | Not Available | Positive | 6484868 - 6486346 | 54533.1 |
| protein of unknown function | SAMN04488055_5305 | Not Available | Positive | 6486459 - 6486773 | 11517.8 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN04488055_5306 | Not Available | Positive | 6486773 - 6487849 | 38661.4 |
| aspartate kinase | SAMN04488055_5307 | Not Available | Positive | 6487872 - 6489194 | 48792.3 |
| dna polymerase iii, alpha subunit | SAMN04488055_5308 | Not Available | Negative | 6489267 - 6492233 | 114619.0 |
| dna polymerase-4 | SAMN04488055_5309 | Not Available | Negative | 6492237 - 6493463 | 46143.1 |
| protein of unknown function | SAMN04488055_5310 | Not Available | Positive | 6493592 - 6494266 | 25899.5 |
| hypothetical protein | SAMN04488055_5311 | Not Available | Negative | 6494405 - 6494869 | 16675.3 |
| helix-turn-helix | SAMN04488055_5312 | Not Available | Positive | 6494981 - 6495739 | 28817.5 |
| orf6n domain-containing protein | SAMN04488055_5313 | Not Available | Positive | 6496204 - 6496767 | 22231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
