Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488055_0513 | Not Available | Negative | 631315 - 635301 | 139922.0 |
| methionyl aminopeptidase | SAMN04488055_0514 | Not Available | Negative | 635560 - 636324 | 27821.9 |
| dipeptidase e | SAMN04488055_0515 | Not Available | Positive | 636414 - 637118 | 25653.0 |
| hypothetical protein | SAMN04488055_0516 | Not Available | Negative | 637122 - 637601 | 18544.2 |
| hypothetical protein | SAMN04488055_0517 | Not Available | Negative | 637591 - 638373 | 29819.4 |
| hypothetical protein | SAMN04488055_0518 | Not Available | Negative | 638733 - 639545 | 29542.1 |
| signal transduction histidine kinase | SAMN04488055_0519 | Not Available | Positive | 639877 - 642849 | 113671.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488055_0520 | Not Available | Negative | 642866 - 643504 | 23810.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488055_0521 | Not Available | Positive | 643747 - 669744 | 893788.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488055_0522 | Not Available | Positive | 669800 - 670804 | 37360.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
