Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase trme | SAMN04488055_5172 | Not Available | Positive | 6303649 - 6305025 | 49255.1 |
| duplicated orphan permease | SAMN04488055_5174 | Not Available | Positive | 6305706 - 6308138 | 90330.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488055_5175 | Not Available | Positive | 6308404 - 6309486 | 40908.1 |
| tetratricopeptide repeat-containing protein | SAMN04488055_5176 | Not Available | Positive | 6309709 - 6311922 | 84101.7 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488055_5177 | Not Available | Positive | 6311919 - 6312554 | 23057.2 |
| hypothetical protein | SAMN04488055_5178 | Not Available | Positive | 6312645 - 6313241 | 21687.9 |
| ompa family protein | SAMN04488055_5179 | Not Available | Positive | 6313293 - 6314615 | 48522.8 |
| hypothetical protein | SAMN04488055_5180 | Not Available | Positive | 6314626 - 6315858 | 45900.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_5181 | Not Available | Positive | 6315993 - 6316586 | 23013.9 |
| protein of unknown function | SAMN04488055_5182 | Not Available | Positive | 6316669 - 6317850 | 43966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
