Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488055_5132 | Not Available | Negative | 6257500 - 6257889 | 14119.7 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04488055_5133 | Not Available | Negative | 6258202 - 6259866 | 57859.4 |
| dna polymerase-3 subunit gamma/tau | SAMN04488055_5134 | Not Available | Negative | 6259975 - 6261879 | 70821.0 |
| zn-dependent protease with chaperone function | SAMN04488055_5135 | Not Available | Negative | 6261973 - 6264108 | 82697.0 |
| hypothetical protein | SAMN04488055_5136 | Not Available | Negative | 6264254 - 6265417 | 45026.3 |
| rnd family efflux transporter, mfp subunit | SAMN04488055_5137 | Not Available | Positive | 6265676 - 6266938 | 46875.2 |
| putative abc transport system permease protein | SAMN04488055_5138 | Not Available | Positive | 6266955 - 6268310 | 49287.8 |
| outer membrane protein tolc | SAMN04488055_5139 | Not Available | Positive | 6268303 - 6269775 | 56120.7 |
| hypothetical protein | SAMN04488055_5140 | Not Available | Positive | 6269871 - 6270449 | 21984.3 |
| hypothetical protein | SAMN04488055_5141 | Not Available | Negative | 6270305 - 6270592 | 10689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
