Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit seca | SAMN04488055_5052 | Not Available | Negative | 6147909 - 6151229 | 124388.0 |
| pkd-like family protein | SAMN04488055_5053 | Not Available | Negative | 6151552 - 6153051 | 56217.5 |
| protein of unknown function | SAMN04488055_5054 | Not Available | Negative | 6153071 - 6153823 | 27904.9 |
| susd family protein | SAMN04488055_5055 | Not Available | Negative | 6153844 - 6155292 | 55448.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_5056 | Not Available | Negative | 6155310 - 6158666 | 125631.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_5057 | Not Available | Negative | 6158761 - 6159699 | 35186.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_5058 | Not Available | Negative | 6159823 - 6160416 | 23109.1 |
| fucose permease | SAMN04488055_5059 | Not Available | Positive | 6160574 - 6161857 | 45770.2 |
| predicted dehydrogenase | SAMN04488055_5060 | Not Available | Positive | 6161872 - 6163035 | 42464.2 |
| sugar phosphate isomerase/epimerase | SAMN04488055_5061 | Not Available | Positive | 6163130 - 6164182 | 39208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
