Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family s41 | SAMN04488055_4912 | Not Available | Negative | 5992093 - 5993655 | 55689.9 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04488055_4913 | Not Available | Negative | 5993874 - 5994596 | 27497.6 |
| 23s rrna pseudouridine2605 synthase | SAMN04488055_4914 | Not Available | Negative | 5994645 - 5996201 | 59422.0 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN04488055_4915 | Not Available | Negative | 5996244 - 5997257 | 38202.9 |
| 3-oxoadipyl-coa thiolase | SAMN04488055_4916 | Not Available | Positive | 5997383 - 5998582 | 42949.9 |
| eama domain-containing membrane protein rard | SAMN04488055_4917 | Not Available | Positive | 5998584 - 5999486 | 32979.5 |
| rna polymerase, sigma subunit, ecf family | SAMN04488055_4918 | Not Available | Negative | 5999528 - 6000109 | 22727.9 |
| excinuclease abc subunit a | SAMN04488055_4919 | Not Available | Positive | 6000379 - 6003183 | 104954.0 |
| protein of unknown function | SAMN04488055_4920 | Not Available | Negative | 6003228 - 6003800 | 21487.0 |
| aminoglycoside 6-adenylyltransferase | SAMN04488055_4921 | Not Available | Positive | 6003856 - 6004734 | 34325.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
