Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein, porp/sprf family | SAMN04488055_4821 | Not Available | Negative | 5887216 - 5888196 | 36386.7 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04488055_4822 | Not Available | Negative | 5888222 - 5892259 | 138259.0 |
| hypothetical protein | SAMN04488055_4823 | Not Available | Negative | 5892703 - 5893092 | 13477.2 |
| signal transduction histidine kinase | SAMN04488055_4824 | Not Available | Positive | 5893262 - 5895223 | 74209.7 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488055_4825 | Not Available | Positive | 5895210 - 5895842 | 22932.1 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488055_4826 | Not Available | Negative | 5895845 - 5899558 | 141538.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488055_4827 | Not Available | Negative | 5899555 - 5900880 | 51280.5 |
| wg containing repeat-containing protein | SAMN04488055_4828 | Not Available | Positive | 5901019 - 5902080 | 40464.9 |
| hypothetical protein | SAMN04488055_4829 | Not Available | Positive | 5902188 - 5902634 | 15422.5 |
| hypothetical protein | SAMN04488055_4830 | Not Available | Negative | 5902530 - 5902967 | 15542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
