Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | SAMN04488055_4671 | Not Available | Positive | 5717542 - 5718063 | 19572.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488055_4672 | Not Available | Positive | 5718109 - 5719269 | 43661.8 |
| hypothetical protein | SAMN04488055_4673 | Not Available | Negative | 5719276 - 5719968 | 26253.1 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488055_4674 | Not Available | Negative | 5720009 - 5720524 | 19291.7 |
| hypothetical protein | SAMN04488055_4675 | Not Available | Negative | 5720527 - 5721015 | 19095.1 |
| polygalacturonase | SAMN04488055_4676 | Not Available | Negative | 5721945 - 5723513 | 55988.6 |
| uncharacterized protein, contains gba2_n and duf608 domains | SAMN04488055_4677 | Not Available | Positive | 5723660 - 5726257 | 95455.5 |
| hypothetical protein | SAMN04488055_4678 | Not Available | Positive | 5726566 - 5727171 | 23318.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488055_4679 | Not Available | Positive | 5727222 - 5727812 | 22893.7 |
| hypothetical protein | SAMN04488055_4680 | Not Available | Positive | 5727887 - 5729239 | 49848.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
