Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_4451 | Not Available | Negative | 5466475 - 5467110 | 24364.5 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488055_4452 | Not Available | Negative | 5467118 - 5467906 | 29896.2 |
| uncharacterized membrane protein spoiim, required for sporulation | SAMN04488055_4453 | Not Available | Positive | 5467963 - 5468949 | 37410.0 |
| protein of unknown function | SAMN04488055_4454 | Not Available | Positive | 5468946 - 5469701 | 29554.5 |
| protein of unknown function | SAMN04488055_4455 | Not Available | Positive | 5469708 - 5470940 | 47521.0 |
| moxr-like atpase | SAMN04488055_4456 | Not Available | Positive | 5470940 - 5471920 | 36213.2 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN04488055_4457 | Not Available | Positive | 5471922 - 5473265 | 51934.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488055_4458 | Not Available | Negative | 5473266 - 5475938 | 101546.0 |
| dna-binding response regulator, lytr/algr family | SAMN04488055_4459 | Not Available | Negative | 5476180 - 5476875 | 26101.1 |
| histidine kinase | SAMN04488055_4460 | Not Available | Negative | 5476872 - 5477861 | 38565.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
