Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 5452628 - 5452700 | Not Available |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488055_4442 | Not Available | Positive | 5453189 - 5453911 | 26385.9 |
| l,d-transpeptidase catalytic domain | SAMN04488055_4443 | Not Available | Positive | 5454038 - 5454772 | 26747.5 |
| n-terminal ig-like domain of cellulase | SAMN04488055_4444 | Not Available | Positive | 5454822 - 5456585 | 65631.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_4445 | Not Available | Negative | 5456562 - 5457041 | 18837.8 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN04488055_4446 | Not Available | Positive | 5457301 - 5458284 | 36900.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_4447 | Not Available | Positive | 5458555 - 5462079 | 130678.0 |
| starch-binding associating with outer membrane | SAMN04488055_4448 | Not Available | Positive | 5462098 - 5463858 | 66219.5 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488055_4449 | Not Available | Positive | 5463880 - 5464983 | 39777.0 |
| hypothetical protein | SAMN04488055_4450 | Not Available | Negative | 5464961 - 5466478 | 56849.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
