Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488055_0433 | Not Available | Negative | 535375 - 538626 | 118848.0 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN04488055_0434 | Not Available | Positive | 539056 - 540258 | 44660.1 |
| family of unknown function | SAMN04488055_0435 | Not Available | Negative | 540400 - 545196 | 178544.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0436 | Not Available | Positive | 545731 - 548979 | 119125.0 |
| susd family protein | SAMN04488055_0437 | Not Available | Positive | 548999 - 550591 | 60569.9 |
| hypothetical protein | SAMN04488055_0438 | Not Available | Positive | 550610 - 551278 | 25277.4 |
| protein of unknown function | SAMN04488055_0439 | Not Available | Positive | 551296 - 552234 | 36088.8 |
| dna-binding response regulator, lytr/algr family | SAMN04488055_0440 | Not Available | Negative | 552349 - 553074 | 27335.6 |
| histidine kinase | SAMN04488055_0441 | Not Available | Negative | 553078 - 554166 | 41578.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488055_0442 | Not Available | Negative | 554236 - 556389 | 80114.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
