Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase d, 3'-phosphoesterase domain-containing protein | SAMN04488055_4400 | Not Available | Positive | 5412098 - 5412829 | 27208.1 |
| bifunctional non-homologous end joining protein ligd | SAMN04488055_4401 | Not Available | Positive | 5412847 - 5414838 | 74390.5 |
| hypothetical protein | SAMN04488055_4402 | Not Available | Positive | 5414835 - 5414978 | 5525.04 |
| hypothetical protein | SAMN04488055_4403 | Not Available | Positive | 5414984 - 5415481 | 17751.1 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488055_4404 | Not Available | Positive | 5415506 - 5416846 | 49593.8 |
| hypothetical protein | SAMN04488055_4405 | Not Available | Positive | 5417000 - 5417338 | 12605.5 |
| k+-transporting atpase atpase a chain | SAMN04488055_4406 | Not Available | Positive | 5417517 - 5419211 | 61479.9 |
| k+-transporting atpase atpase b chain | SAMN04488055_4407 | Not Available | Positive | 5419231 - 5421279 | 73109.6 |
| k+-transporting atpase atpase c chain | SAMN04488055_4408 | Not Available | Positive | 5421291 - 5421854 | 19439.8 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN04488055_4409 | Not Available | Positive | 5421926 - 5423002 | 40304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
