Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN04488055_4380 | Not Available | Positive | 5394885 - 5395388 | 18941.9 |
| hypothetical protein | SAMN04488055_4381 | Not Available | Positive | 5395385 - 5395852 | 18594.4 |
| aspartate ammonia-lyase | SAMN04488055_4382 | Not Available | Positive | 5395957 - 5397363 | 50940.4 |
| asparaginase | SAMN04488055_4383 | Not Available | Positive | 5397366 - 5398424 | 37702.4 |
| anaerobic c4-dicarboxylate transporter dcua | SAMN04488055_4384 | Not Available | Positive | 5398460 - 5399800 | 47302.9 |
| opacity protein | SAMN04488055_4385 | Not Available | Positive | 5399825 - 5400982 | 44609.2 |
| catechol 2,3-dioxygenase | SAMN04488055_4386 | Not Available | Positive | 5401000 - 5401488 | 18346.7 |
| low affinity fe/cu permease | SAMN04488055_4387 | Not Available | Negative | 5401485 - 5401940 | 17092.7 |
| two-component system, ntrc family, response regulator hydg | SAMN04488055_4388 | Not Available | Negative | 5401946 - 5403382 | 53922.0 |
| response regulator receiver domain-containing protein | SAMN04488055_4389 | Not Available | Negative | 5403446 - 5404099 | 24538.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
