Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hslj | SAMN04488055_4160 | Not Available | Negative | 5163875 - 5164339 | 16424.7 |
| peptidase s46 | SAMN04488055_4161 | Not Available | Positive | 5164533 - 5166674 | 79777.0 |
| tetratricopeptide repeat-containing protein | SAMN04488055_4162 | Not Available | Positive | 5166754 - 5167764 | 37989.3 |
| putative zincin peptidase | SAMN04488055_4163 | Not Available | Positive | 5167775 - 5168305 | 19354.1 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488055_4164 | Not Available | Negative | 5168302 - 5169588 | 48186.8 |
| predicted dehydrogenase | SAMN04488055_4165 | Not Available | Negative | 5169672 - 5171018 | 49711.3 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488055_4166 | Not Available | Negative | 5171109 - 5172074 | 35821.2 |
| hydroxypyruvate isomerase | SAMN04488055_4167 | Not Available | Positive | 5172276 - 5173205 | 34053.1 |
| protein of unknown function | SAMN04488055_4168 | Not Available | Negative | 5173277 - 5174005 | 27902.4 |
| acetyl esterase/lipase | SAMN04488055_4169 | Not Available | Negative | 5174012 - 5174902 | 32082.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
