Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04488055_4099 | Not Available | Positive | 5084040 - 5085704 | 61636.4 |
| rhomboid protease glup | SAMN04488055_4100 | Not Available | Positive | 5085770 - 5087218 | 55568.0 |
| hypothetical protein | SAMN04488055_4101 | Not Available | Negative | 5087225 - 5088277 | 41474.7 |
| sugar lactone lactonase yvre | SAMN04488055_4102 | Not Available | Positive | 5088335 - 5089213 | 32368.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488055_4103 | Not Available | Negative | 5089361 - 5090110 | 26400.0 |
| gh3 auxin-responsive promoter | SAMN04488055_4104 | Not Available | Negative | 5090143 - 5091666 | 57847.3 |
| lipopolysaccharide export system atp-binding protein | SAMN04488055_4105 | Not Available | Negative | 5091697 - 5092458 | 28518.7 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04488055_4106 | Not Available | Positive | 5092606 - 5093559 | 36133.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488055_4107 | Not Available | Negative | 5093762 - 5094475 | 26314.8 |
| outer membrane insertion c-terminal signal | SAMN04488055_4108 | Not Available | Negative | 5094822 - 5095448 | 22342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
