Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN04488055_4058 | Not Available | Negative | 5042273 - 5042827 | 21574.9 |
| predicted zn-dependent peptidase | SAMN04488055_4059 | Not Available | Negative | 5042939 - 5045875 | 110206.0 |
| hypothetical protein | SAMN04488055_4060 | Not Available | Negative | 5045993 - 5046319 | 12074.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488055_4061 | Not Available | Negative | 5046442 - 5047365 | 34992.3 |
| hypothetical protein | SAMN04488055_4062 | Not Available | Negative | 5047391 - 5048434 | 37704.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_4063 | Not Available | Negative | 5048462 - 5048947 | 19206.1 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488055_4064 | Not Available | Positive | 5049392 - 5050594 | 43858.6 |
| beta-lactamase class d | SAMN04488055_4065 | Not Available | Positive | 5050687 - 5051463 | 29901.0 |
| ca-activated chloride channel family protein | SAMN04488055_4066 | Not Available | Positive | 5051575 - 5052612 | 38724.4 |
| tpr repeat-containing protein | SAMN04488055_4067 | Not Available | Positive | 5052609 - 5053358 | 28789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
