Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0393 | Not Available | Negative | 483524 - 486586 | 114513.0 |
| ipt/tig domain-containing protein | SAMN04488055_0394 | Not Available | Negative | 486602 - 487921 | 49200.3 |
| ligand-binding sensor domain-containing protein | SAMN04488055_0395 | Not Available | Positive | 488204 - 491293 | 117233.0 |
| helix-turn-helix domain-containing protein | SAMN04488055_0396 | Not Available | Negative | 491275 - 492078 | 30491.0 |
| alpha-1,2-mannosidase, putative | SAMN04488055_0397 | Not Available | Negative | 492126 - 494396 | 85602.4 |
| protein of unknown function | SAMN04488055_0398 | Not Available | Negative | 494416 - 496887 | 93163.3 |
| thioredoxin | SAMN04488055_0399 | Not Available | Positive | 497190 - 498782 | 59855.2 |
| ricin-type beta-trefoil lectin domain-like | SAMN04488055_0400 | Not Available | Positive | 499292 - 500734 | 52317.3 |
| cytosine/adenosine deaminase | SAMN04488055_0401 | Not Available | Negative | 500785 - 502104 | 47866.0 |
| arac-type dna-binding protein | SAMN04488055_0402 | Not Available | Positive | 502197 - 503054 | 33130.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
