Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488055_0030 | Not Available | Positive | 29731 - 33147 | 125286.0 |
| starch-binding associating with outer membrane | SAMN04488055_0031 | Not Available | Positive | 33175 - 34728 | 57658.4 |
| hypothetical protein | SAMN04488055_0032 | Not Available | Positive | 34731 - 35744 | 36187.8 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04488055_0033 | Not Available | Negative | 35763 - 36740 | 36759.5 |
| hypothetical protein | SAMN04488055_0034 | Not Available | Negative | 36799 - 37209 | 14750.8 |
| hypothetical protein | SAMN04488055_0035 | Not Available | Negative | 37219 - 37974 | 28798.4 |
| aspartyl protease | SAMN04488055_0036 | Not Available | Negative | 38033 - 39469 | 53478.8 |
| hypothetical protein | SAMN04488055_0037 | Not Available | Negative | 39481 - 39894 | 15762.8 |
| hypothetical protein | SAMN04488055_0038 | Not Available | Negative | 39917 - 40348 | 16155.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0039 | Not Available | Negative | 40345 - 40884 | 20637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
