Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488055_0333 | Not Available | Positive | 399308 - 400726 | 53016.1 |
| caspase domain-containing protein | SAMN04488055_0334 | Not Available | Positive | 400738 - 401520 | 29596.7 |
| hypothetical protein | SAMN04488055_0335 | Not Available | Positive | 401531 - 403024 | 55571.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488055_0336 | Not Available | Positive | 403117 - 403683 | 22340.0 |
| atpase | SAMN04488055_0337 | Not Available | Positive | 403872 - 405026 | 45227.6 |
| tpr repeat | SAMN04488055_0338 | Not Available | Positive | 405071 - 407890 | 108667.0 |
| 2,4-dienoyl-coa reductase | SAMN04488055_0339 | Not Available | Positive | 407962 - 409017 | 37836.3 |
| doxx-like family protein | SAMN04488055_0340 | Not Available | Positive | 409118 - 409501 | 13686.4 |
| protein of unknown function | SAMN04488055_0341 | Not Available | Negative | 409559 - 410881 | 47225.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0342 | Not Available | Positive | 411100 - 411654 | 21389.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
