Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga niabensis |
| Strain | strain DSM 24787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1926341 bp
Thymine Count
1920849 bp
Guanine Count
1638811 bp
Cytosine Count
1640585 bp
Genome Length
7130081 bp
Protein-coding Genes
5774 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488055_0020 | Not Available | Positive | 20965 - 21417 | 17446.8 |
| dna-binding transcriptional regulator, arsr family | SAMN04488055_0021 | Not Available | Positive | 21398 - 21721 | 12543.3 |
| hypothetical protein | SAMN04488055_0022 | Not Available | Positive | 21724 - 22389 | 24214.5 |
| dna-binding transcriptional regulator, merr family | SAMN04488055_0023 | Not Available | Negative | 22599 - 23363 | 29203.6 |
| hypothetical protein | SAMN04488055_0024 | Not Available | Positive | 23547 - 24971 | 54572.1 |
| phosphoenolpyruvate phosphomutase | SAMN04488055_0025 | Not Available | Positive | 24997 - 25830 | 29571.5 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488055_0026 | Not Available | Positive | 25925 - 26335 | 14861.0 |
| hypothetical protein | SAMN04488055_0027 | Not Available | Positive | 26578 - 27762 | 45486.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488055_0028 | Not Available | Positive | 27849 - 28454 | 23254.3 |
| fecr protein | SAMN04488055_0029 | Not Available | Positive | 28521 - 29600 | 39963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
